SIG_CREATE
Converts raw BLAST data to aligned signature data by species. Species name can be optionally abbreviated.
Enter inputs and click "Run Program" to get started.
This program takes raw BLAST data and filters out everything but the species name,
number and sequence data.
If the "Maximum species name length" parameter is omitted, the entire species name will be included. Otherwise it is truncated to the given integer value.
If it is given, the data from the abbreviation file is applied BEFORE the maxLen parameter. This means that if an abbreviated name is still longer then maxLen, it will be truncated to maxLen. Avoid this by setting the maximum name length to 0.
A sample abbrevation file can be found in the Examples tab. This format must be followed for the abbrevation file to work.
If the "Maximum species name length" parameter is omitted, the entire species name will be included. Otherwise it is truncated to the given integer value.
If it is given, the data from the abbreviation file is applied BEFORE the maxLen parameter. This means that if an abbreviated name is still longer then maxLen, it will be truncated to maxLen. Avoid this by setting the maximum name length to 0.
A sample abbrevation file can be found in the Examples tab. This format must be followed for the abbrevation file to work.
View sample input/output files. All files should be in a plain-text format (.txt, .csv, .xml, etc.).
Download files related to this app.
Program Results
Example Input File
BLASTP 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro
A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and
David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs", Nucleic
Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Stephen
F. Altschul, John C. Wootton, E. Michael Gertz, Richa
Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and
Yi-Kuo Yu (2005) "Protein database searches using
compositionally adjusted substitution matrices", FEBS J.
272:5101-5109.
RID: BNBYHJX0012
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
16,046,802 sequences; 5,513,159,249 total letters
Query=
Length=58
ALIGNMENTS
>ref|ZP_08186820.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
ref|ZP_08187895.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
gb|EGD14382.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
gb|EGD15565.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
Length=456
Score = 115 bits (287), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 108 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 165
>ref|ZP_08187447.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
gb|EGD14962.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
perforans 91-118]
Length=536
Score = 115 bits (288), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|YP_004852463.1| phosphotransferase system enzyme I [Xanthomonas axonopodis pv.
citrumelo F1]
gb|AEO43165.1| phosphotransferase system enzyme I [Xanthomonas axonopodis pv.
citrumelo F1]
Length=576
Score = 115 bits (287), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_06703927.1| phosphotransferase system enzyme I [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gb|EFF44509.1| phosphotransferase system enzyme I [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length=576
Score = 115 bits (287), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_06730677.1| phosphotransferase system enzyme I [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gb|EFF48209.1| phosphotransferase system enzyme I [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length=576
Score = 115 bits (287), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|YP_364856.1| enzyme I of the phosphotransferase system [Xanthomonas campestris
pv. vesicatoria str. 85-10]
emb|CAJ24856.1| Enzyme I of the phosphotransferase system [Xanthomonas campestris
pv. vesicatoria str. 85-10]
Length=576
Score = 115 bits (287), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|NP_643288.1| phosphotransferase system enzyme I [Xanthomonas axonopodis pv.
citri str. 306]
gb|AAM37824.1| phosphotransferase system enzyme I [Xanthomonas axonopodis pv.
citri str. 306]
Length=576
Score = 115 bits (287), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_06486094.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length=576
Score = 114 bits (284), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/58 (98%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDA+QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_06488996.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length=576
Score = 114 bits (284), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/58 (98%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDA+QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_08183960.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
gardneri ATCC 19865]
gb|EGD18408.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
gardneri ATCC 19865]
Length=551
Score = 113 bits (283), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/58 (98%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDALQRI+DGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 163 LSHSAILARSLHLPLVVGVSDALQRIDDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 220
>gb|AEQ95613.1| phosphoenolpyruvate-protein phosphotransferase [Xanthomonas oryzae
pv. oryzicola BLS256]
Length=576
Score = 112 bits (279), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/58 (97%), Positives = 58/58 (100%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVS+A+QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 245
>ref|YP_199916.1| phosphotransferase system enzyme I [Xanthomonas oryzae pv. oryzae
KACC10331]
gb|AAW74531.1| phosphotransferase system enzyme I [Xanthomonas oryzae pv. oryzae
KACC10331]
Length=556
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/58 (95%), Positives = 57/58 (98%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVS+A+QRIEDGDVLIVDA SGQVIVDPKPEHLRDYRERLR
Sbjct 168 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR 225
>ref|YP_450204.1| phosphotransferase system enzyme I [Xanthomonas oryzae pv. oryzae
MAFF 311018]
dbj|BAE67930.1| phosphotransferase system enzyme I [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length=576
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/58 (95%), Positives = 57/58 (98%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVS+A+QRIEDGDVLIVDA SGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR 245
>ref|YP_001915051.1| phosphoenolpyruvate-protein phosphotransferase [Xanthomonas oryzae
pv. oryzae PXO99A]
gb|ACD60519.1| phosphoenolpyruvate-protein phosphotransferase [Xanthomonas oryzae
pv. oryzae PXO99A]
Length=576
Score = 109 bits (273), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/58 (95%), Positives = 57/58 (98%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVS+A+QRIEDGDVLIVDA SGQVIVDPKPEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR 245
>ref|ZP_08178686.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
vesicatoria ATCC 35937]
gb|EGD09058.1| phosphoenolpyruvate--protein phosphotransferase [Xanthomonas
vesicatoria ATCC 35937]
Length=576
Score = 108 bits (270), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/58 (93%), Positives = 57/58 (98%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGVSDA+QRI+DGDVLIVDAGSGQVIVDP P+HLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVSDAVQRIDDGDVLIVDAGSGQVIVDPTPDHLRDYRERLR 245
>ref|YP_242393.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
campestris str. 8004]
ref|YP_001902757.1| PTS sugar importer enzyme I [Xanthomonas campestris pv. campestris
str. B100]
gb|AAY48373.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
campestris str. 8004]
emb|CAP50701.1| PTS sugar importer enzyme I [Xanthomonas campestris pv. campestris]
Length=576
Score = 108 bits (269), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (97%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGV+DA+QR+ DGDVLIVDAGSGQVIVDP PEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR 245
>gb|AEL08044.1| phosphoenolpyruvate-protein phosphotransferase [Xanthomonas campestris
pv. raphani 756C]
Length=576
Score = 108 bits (269), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (97%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGV+DA+QR+ DGDVLIVDAGSGQVIVDP PEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR 245
>ref|NP_638157.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM42081.1| phosphotransferase system enzyme I [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length=576
Score = 108 bits (269), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/58 (91%), Positives = 56/58 (97%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGV+DA+QR+ DGDVLIVDAGSGQVIVDP PEHLRDYRERLR
Sbjct 188 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR 245
>ref|YP_003376621.1| phosphotransferase system (pts), enzymeIprotein [Xanthomonas
albilineans GPE PC73]
emb|CBA16629.1| putative phosphotransferase system (pts), enzymeIprotein [Xanthomonas
albilineans]
Length=568
Score = 84.7 bits (208), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/58 (71%), Positives = 49/58 (84%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPLVVGV+DALQ+I DGDVLI+D G +++DP P+ L DYR R+R
Sbjct 188 LSHSAILARSLHLPLVVGVADALQKINDGDVLIIDGNQGVLLLDPTPQDLHDYRLRVR 245
>gb|AER55770.1| phosphotransferase system enzyme I [Pseudoxanthomonas spadix
BD-a59]
Length=572
Score = 84.0 bits (206), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 46/58 (79%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLH+PLVVG S AL RI DGD LIVD SGQV+VDP LR YR+RL+
Sbjct 188 LSHSAILARSLHMPLVVGASQALSRISDGDALIVDGDSGQVVVDPSARDLRHYRQRLK 245
>ref|ZP_05136556.1| phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
sp. SKA14]
gb|EED40617.1| phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
sp. SKA14]
Length=589
Score = 77.0 bits (188), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/58 (64%), Positives = 45/58 (78%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPL+V V L RI DGDVLI+D G + V+P+ ++LRDYR RL+
Sbjct 203 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITVNPQADNLRDYRARLK 260
>ref|NP_298691.1| phosphotransferase system enzyme I [Xylella fastidiosa 9a5c]
gb|AAF84211.1|AE003971_10 phosphotransferase system enzyme I [Xylella fastidiosa 9a5c]
Length=590
Score = 76.6 bits (187), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/59 (63%), Positives = 46/59 (78%), Gaps = 1/59 (2%)
Query 1 LSHSAILARSLHLPLVVGVSD-ALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILA SLHLPL+VG D LQ+I +GD+LI+D SG++IV+P P+ LR Y RLR
Sbjct 201 LSHSAILAHSLHLPLIVGAGDLQLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR 259
>ref|ZP_00651102.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Dixon]
ref|ZP_00683046.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Ann-1]
ref|YP_001775371.1| phosphotransferase system enzyme I [Xylella fastidiosa M12]
gb|EAO14260.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Dixon]
gb|EAO31408.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Ann-1]
gb|ACA11741.1| phosphotransferase system enzyme I [Xylella fastidiosa M12]
Length=590
Score = 76.3 bits (186), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/59 (63%), Positives = 46/59 (78%), Gaps = 1/59 (2%)
Query 1 LSHSAILARSLHLPLVVGVSDAL-QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILA SLHLPL+VG D L Q+I +GD+LI+D SG++IV+P P+ LR Y RLR
Sbjct 201 LSHSAILAHSLHLPLIVGAGDLLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR 259
>ref|YP_002027335.1| phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
maltophilia R551-3]
gb|ACF50652.1| phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
maltophilia R551-3]
Length=589
Score = 75.1 bits (183), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 44/58 (76%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPL+V V L RI DGDVLI+D G + +P+ ++LRDYR RL+
Sbjct 203 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITSNPQADNLRDYRARLK 260
>ref|YP_001970976.1| putative phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
maltophilia K279a]
emb|CAQ44662.1| putative phosphoenolpyruvate-protein phosphotransferase [Stenotrophomonas
maltophilia K279a]
Length=589
Score = 75.1 bits (183), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 44/58 (76%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPL+V V L RI DGDVLI+D G + +P+ ++LRDYR RL+
Sbjct 203 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITANPQADNLRDYRVRLK 260
>ref|ZP_00679824.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Ann-1]
gb|EAO34535.1| Phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
Ann-1]
Length=590
Score = 74.7 bits (182), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (78%), Gaps = 1/59 (2%)
Query 1 LSHSAILARSLHLPLVVGVSDAL-QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILA SLHLPL+VG + L Q+I +GD+LI+D SG++IV+P P+ LR Y RLR
Sbjct 201 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR 259
>ref|NP_778853.1| phosphotransferase system enzyme I [Xylella fastidiosa Temecula1]
gb|AAO28502.1| phosphotransferase system enzyme I [Xylella fastidiosa Temecula1]
gb|ADN63635.1| phosphotransferase system enzyme I [Xylella fastidiosa subsp.
fastidiosa GB514]
Length=575
Score = 74.7 bits (182), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (78%), Gaps = 1/59 (2%)
Query 1 LSHSAILARSLHLPLVVGVSDAL-QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILA SLHLPL+VG + L Q+I +GD+LI+D SG++IV+P P+ LR Y RLR
Sbjct 186 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR 244
>ref|YP_001829379.1| phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
M23]
gb|ACB92105.1| phosphoenolpyruvate-protein phosphotransferase [Xylella fastidiosa
M23]
gb|EGO82119.1| Phosphoenolpyruvate-protein kinase (PTS system EI component in
bacteria) PtsA [Xylella fastidiosa EB92.1]
Length=590
Score = 74.7 bits (182), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (78%), Gaps = 1/59 (2%)
Query 1 LSHSAILARSLHLPLVVGVSDAL-QRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILA SLHLPL+VG + L Q+I +GD+LI+D SG++IV+P P+ LR Y RLR
Sbjct 201 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR 259
>ref|YP_004791503.1| phosphoenolpyruvate-protein phosphotransferase [Burkholderia
sp. JV3]
gb|AEM50277.1| phosphoenolpyruvate-protein phosphotransferase [Burkholderia
sp. JV3]
Length=589
Score = 74.3 bits (181), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
LSHSAILARSLHLPL+V V L RI DGDVLI+D G + +P ++LRDYR RL+
Sbjct 203 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITANPLADNLRDYRARLK 260
>ref|YP_004146140.1| phosphoenolpyruvate-protein phosphotransferase [Pseudoxanthomonas
suwonensis 11-1]
gb|ADV26909.1| phosphoenolpyruvate-protein phosphotransferase [Pseudoxanthomonas
suwonensis 11-1]
Length=569
Score = 73.2 bits (178), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/55 (64%), Positives = 44/55 (80%), Gaps = 0/55 (0%)
Query 1 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRE 55
LSH+AILARSLH+PLVVG ++ L RI DGDV++VD SGQ+++DP LR YRE
Sbjct 188 LSHTAILARSLHMPLVVGAAEVLSRINDGDVVMVDGESGQLVLDPDAGDLRRYRE 242
>ref|ZP_08691282.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 2_1_31]
gb|EEO39081.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 2_1_31]
Length=575
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L+ +ED +LIVDA +G+VIV+P E L+ YRE+
Sbjct 190 AHSSIMARSLELPAVVGVGTVLENLEDNQILIVDALNGEVIVNPDEETLKIYREK 244
>ref|ZP_06747157.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 1_1_41FAA]
gb|EFG29405.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 1_1_41FAA]
Length=575
Score = 66.6 bits (161), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L+ +ED +LIVDA +G+VIV+P E L+ YRE+
Sbjct 190 AHSSIMARSLELPAVVGVGAVLENLEDNQILIVDALNGEVIVNPDEETLKIYREK 244
>ref|YP_004858248.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus coagulans
36D1]
gb|AEO99467.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus coagulans
36D1]
Length=573
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/55 (53%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG A+Q I++GD++IVD SG V V+P PE + +Y+++
Sbjct 189 SHSAIMARSLEIPAVVGTKTAIQDIQNGDLVIVDGNSGDVHVNPTPEMVDEYKQK 243
>ref|ZP_04573402.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 4_1_13]
gb|EEO40781.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 4_1_13]
Length=574
Score = 64.7 bits (156), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (73%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L R+ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGAVLDRLEDNQILIVDALKGEVIVSPDVETLQIYKEK 244
>ref|YP_004638766.1| PtsI [Paenibacillus mucilaginosus KNP414]
gb|AEI38896.1| PtsI [Paenibacillus mucilaginosus KNP414]
Length=574
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/55 (53%), Positives = 43/55 (78%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG + L+ ++DGD++I+D +GQVIV P+P + +YRE+
Sbjct 188 SHSAIMARSLEIPAVVGTKNVLEVVQDGDLVILDGLTGQVIVKPEPAVVEEYREK 242
>ref|ZP_00143701.1| Phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gb|EAA24689.1| Phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length=574
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV + L ++ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK 244
>ref|ZP_05552347.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_36A2]
gb|EEU31250.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_36A2]
Length=574
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV + L ++ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK 244
>ref|ZP_06749529.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_27]
gb|EFG35451.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_27]
Length=574
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV + L ++ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK 244
>ref|ZP_08028455.1| phosphoenolpyruvate-protein phosphotransferase [Solobacterium
moorei F0204]
gb|EFW24839.1| phosphoenolpyruvate-protein phosphotransferase [Solobacterium
moorei F0204]
Length=568
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/55 (51%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P +VGV+D L ++ GD++I+DA +G+VI DP E + +Y +R
Sbjct 185 SHSAIMARSLEIPAIVGVTDILHTLKSGDLVILDAINGEVITDPTEEQIAEYTKR 239
>ref|ZP_06026793.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
periodonticum ATCC 33693]
gb|EFE86602.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
periodonticum ATCC 33693]
Length=575
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 40/55 (73%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L+ +ED ++IVDA G+VIV P E L+ YRE+
Sbjct 190 AHSSIMARSLELPAVVGVGAVLEDLEDNQIMIVDALKGEVIVAPDEETLKIYREK 244
>ref|YP_004568386.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus coagulans
2-6]
gb|AEH53000.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus coagulans
2-6]
Length=511
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/55 (53%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG A+Q I++GD++IVD SG V V+P PE + +Y+++
Sbjct 127 SHSAIMARSLEIPAVVGTKTAIQDIQNGDLVIVDGNSGDVYVNPTPEIVDEYKQK 181
>ref|YP_001375975.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gb|ABS22980.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cytotoxicus
NVH 391-98]
Length=570
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG A+++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVAMEKIQNGDIVIIDGLDGEVIVNPSEETLRTFEEK 243
>ref|ZP_03634786.1| hypothetical protein HOLDEFILI_02082 [Holdemania filiformis DSM
12042]
gb|EEF67751.1| hypothetical protein HOLDEFILI_02082 [Holdemania filiformis DSM
12042]
Length=568
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG + +++ GD+LI+DA GQVI++P PE +++Y +
Sbjct 185 SHSAIMARSLEIPAVVGCAGIMEQASQGDLLILDAVEGQVILNPTPEQVKEYEAK 239
>ref|ZP_08532509.1| phosphoenolpyruvate-protein phosphotransferase [Caldalkalibacillus
thermarum TA2.A1]
gb|EGL83374.1| phosphoenolpyruvate-protein phosphotransferase [Caldalkalibacillus
thermarum TA2.A1]
Length=573
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/55 (51%), Positives = 37/55 (67%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG ++IE G +IVD G+VIV+P PE L Y ++
Sbjct 189 SHSAIMARSLEIPAVVGTKIVTEKIESGTTIIVDGNEGKVIVNPTPEELHSYEQK 243
>ref|ZP_01172221.1| PtsI [Bacillus sp. NRRL B-14911]
gb|EAR65077.1| PtsI [Bacillus sp. NRRL B-14911]
Length=571
Score = 63.2 bits (152), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/55 (51%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG A + I++GD++IVD +GQV V+P PE + Y+E+
Sbjct 188 SHSAIMARSMEIPAVVGTKTATEEIQNGDMVIVDGLTGQVHVNPTPEAIESYKEQ 242
>ref|NP_602593.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL93892.1| Phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length=579
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 195 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDALKGEVIVSPDVETLQIYKEK 249
>ref|ZP_06871860.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gb|EFG94532.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length=575
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 191 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDALKGEVIVSPDVETLQIYKEK 245
>ref|ZP_08600521.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 11_3_2]
gb|EGN64332.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 11_3_2]
Length=574
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 40/55 (73%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L ++ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGVVLDKLEDNQILIVDAIKGEVIVSPDVETLQIYKEK 244
>ref|ZP_04302247.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
MM3]
gb|EEK66011.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
MM3]
Length=570
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04235318.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-28]
gb|EEL32935.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-28]
Length=570
Score = 62.4 bits (150), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_02392103.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0442]
ref|ZP_02878438.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0465]
ref|ZP_05147676.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. CNEVA-9066]
ref|ZP_05201735.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Kruger B]
gb|EDR93872.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0442]
gb|EDT19582.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0465]
Length=570
Score = 62.4 bits (150), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|NP_980409.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 10987]
gb|AAS43017.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 10987]
Length=568
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKFVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|YP_002453018.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH820]
gb|ACK91906.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH820]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|NP_846501.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Ames]
ref|YP_020909.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. 'Ames Ancestor']
ref|YP_030208.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Sterne]
ref|ZP_00394399.1| COG1080: Phosphoenolpyruvate-protein kinase (PTS system EI component
in bacteria) [Bacillus anthracis str. A2012]
ref|ZP_02215887.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0488]
ref|ZP_02397777.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0193]
ref|ZP_02896315.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0389]
ref|ZP_02935018.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0174]
ref|ZP_03018956.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
Tsiankovskii-I]
ref|YP_002816835.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. CDC 684]
ref|YP_002868348.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0248]
ref|ZP_05193868.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Western North America USA6153]
ref|ZP_05206204.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Vollum]
ref|ZP_05210168.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Australia 94]
gb|AAP27987.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Ames]
gb|AAT33384.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. 'Ames Ancestor']
gb|AAT56259.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. Sterne]
gb|EDR18683.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0488]
gb|EDR87940.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0193]
gb|EDS98256.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0389]
gb|EDT67005.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0174]
gb|EDV16922.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
Tsiankovskii-I]
gb|ACP17586.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. CDC 684]
gb|ACQ48309.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A0248]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04086099.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gb|EEM82199.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04116359.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gb|EEM51858.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04103753.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar berliner ATCC 10792]
ref|ZP_04134702.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
ref|ZP_04141029.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
Bt407]
ref|ZP_04187683.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1271]
gb|EEL80561.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1271]
gb|EEM27155.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
Bt407]
gb|EEM33481.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gb|EEM64431.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gb|AEA17717.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar chinensis CT-43]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04290943.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
R309803]
gb|EEK77263.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
R309803]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|YP_085385.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
E33L]
gb|AAU16463.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
E33L]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|NP_833766.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 14579]
ref|ZP_03231954.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1134]
ref|YP_002368852.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
B4264]
ref|ZP_04121968.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pakistani str. T13001]
ref|ZP_04204771.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
F65185]
ref|ZP_04213808.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock4-2]
ref|ZP_04241073.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock1-15]
ref|ZP_04258300.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-Cer4]
ref|ZP_04274990.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST24]
ref|ZP_04280444.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
m1550]
ref|ZP_04307670.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
172560W]
ref|ZP_04319226.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 10876]
ref|YP_003666241.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
BMB171]
gb|AAP10967.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 14579]
gb|EDZ50946.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1134]
gb|ACK63942.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
B4264]
gb|EEK49065.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 10876]
gb|EEK60552.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
172560W]
gb|EEK87849.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
m1550]
gb|EEK93256.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST24]
gb|EEL09801.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-Cer4]
gb|EEL27197.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock1-15]
gb|EEL54410.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock4-2]
gb|EEL63446.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
F65185]
gb|EEM46303.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pakistani str. T13001]
gb|ADH08521.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
BMB171]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_00236969.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
G9241]
ref|YP_038108.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar konkukian str. 97-27]
ref|ZP_03102386.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
W]
ref|ZP_03106025.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
NVH0597-99]
ref|ZP_03113172.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
03BB108]
ref|ZP_03238291.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
H3081.97]
ref|YP_002340110.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH187]
ref|YP_002531555.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Q1]
ref|ZP_04080253.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
ref|ZP_04092124.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
ref|ZP_04098188.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
ref|ZP_04110055.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
ref|ZP_04147359.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
ref|ZP_04224228.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-42]
ref|ZP_04252766.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
95/8201]
ref|ZP_04269329.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST26]
ref|ZP_04285707.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 4342]
ref|ZP_04313459.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BGSC 6E1]
ref|ZP_04324881.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
m1293]
ref|ZP_05183440.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus anthracis
str. A1055]
ref|YP_003793756.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
biovar anthracis str. CI]
gb|EAL15539.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
G9241]
gb|AAT60709.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar konkukian str. 97-27]
gb|EDX56479.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
W]
gb|EDX62061.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
03BB108]
gb|EDX69039.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
NVH0597-99]
gb|EDZ55797.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
H3081.97]
gb|ACJ80961.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH187]
gb|ACM14266.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Q1]
gb|EEK43441.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
m1293]
gb|EEK54847.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BGSC 6E1]
gb|EEK82341.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
ATCC 4342]
gb|EEK98860.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST26]
gb|EEL15351.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
95/8201]
gb|EEL44048.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-42]
gb|EEM20912.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gb|EEM58089.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gb|EEM70108.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gb|EEM75997.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gb|EEM87958.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gb|ADK06618.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
biovar anthracis str. CI]
gb|ADY23214.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar finitimus YBT-020]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_05815865.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_33]
gb|EEW94226.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 3_1_33]
Length=574
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK 244
>ref|YP_002751412.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
03BB102]
gb|ACO26324.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
03BB102]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_00742226.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
ref|YP_002447620.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
G9842]
ref|ZP_04066710.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
IBL 4222]
gb|EAO53498.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gb|ACK97670.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
G9842]
gb|EEN01509.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
IBL 4222]
Length=570
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_08019358.1| PTS family porter, enzyme I [Lautropia mirabilis ATCC 51599]
gb|EFV94091.1| PTS family porter, enzyme I [Lautropia mirabilis ATCC 51599]
Length=588
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/57 (58%), Positives = 38/57 (67%), Gaps = 0/57 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR 58
SH+AILARSL + V GV DA RI DGD LI+D +G+VIV P L YRER R
Sbjct 191 SHTAILARSLRVAAVTGVDDATGRIRDGDFLILDGDAGKVIVRPDEALLEQYRERQR 247
>ref|ZP_04128117.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar sotto str. T04001]
gb|EEM40016.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
serovar sotto str. T04001]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04176087.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1273]
ref|ZP_04181914.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1272]
gb|EEL86371.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1272]
gb|EEL92214.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH1273]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04229460.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-29]
ref|ZP_04246917.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock1-3]
gb|EEL21335.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock1-3]
gb|EEL38778.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-29]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|YP_896403.1| phosphoenolpyruvate--protein phosphotransferase [Bacillus thuringiensis
str. Al Hakam]
gb|ABK86896.1| phosphoenolpyruvate--protein phosphotransferase [Bacillus thuringiensis
str. Al Hakam]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04208734.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock4-18]
gb|EEL59505.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock4-18]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04193320.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH676]
gb|EEL74897.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH676]
Length=570
Score = 62.0 bits (149), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_07050108.1| PTS enzyme I [Lysinibacillus fusiformis ZC1]
gb|EFI68193.1| PTS enzyme I [Lysinibacillus fusiformis ZC1]
Length=570
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 40/55 (73%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG A I+DGD LIVD +GQV+V+P + + DY+E+
Sbjct 188 SHSAIMARSLEIPAVVGAGIATTTIQDGDYLIVDGLTGQVLVNPSADVIADYQEK 242
>ref|ZP_04073701.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
IBL 200]
gb|EEM94548.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus thuringiensis
IBL 200]
Length=570
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGAKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>gb|EGQ79515.1| PTS family fructose porter, IIA/HPr component [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length=459
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 75 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK 129
>ref|ZP_04263665.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST196]
gb|EEL04561.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
BDRD-ST196]
Length=570
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|YP_001646673.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus weihenstephanensis
KBAB4]
gb|ABY45045.1| phosphoenolpyruvate-protein phosphotransferase [Bacillus weihenstephanensis
KBAB4]
Length=570
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04152713.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus pseudomycoides
DSM 12442]
ref|ZP_04158419.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
Rock3-17]
ref|ZP_04164032.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
Rock1-4]
gb|EEM04252.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
Rock1-4]
gb|EEM09811.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
Rock3-17]
gb|EEM15475.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus pseudomycoides
DSM 12442]
Length=570
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRTFEEK 243
>ref|ZP_06341865.1| phosphoenolpyruvate-protein phosphotransferase [Bulleidia extructa
W1219]
gb|EFC05693.1| phosphoenolpyruvate-protein phosphotransferase [Bulleidia extructa
W1219]
Length=567
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERL 57
SHSAI+ARSL +P VVG D L ++++GD +I+DA +G++I+ P E + Y+E+L
Sbjct 185 SHSAIMARSLEIPAVVGCGDLLSQVKNGDEIILDAITGEIILHPTAEQIASYQEKL 240
>ref|ZP_04170399.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
DSM 2048]
gb|EEL97889.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus mycoides
DSM 2048]
Length=570
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|ZP_04199056.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH603]
gb|EEL69233.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH603]
Length=570
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK 243
>ref|YP_003310640.1| phosphoenolpyruvate-protein phosphotransferase [Sebaldella termitidis
ATCC 33386]
gb|ACZ10709.1| phosphoenolpyruvate-protein phosphotransferase [Sebaldella termitidis
ATCC 33386]
Length=568
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/55 (51%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL LP VVGV DAL+ + DG ++++ G++I++P E L+DY E+
Sbjct 190 SHSAIMARSLELPAVVGVKDALKEMADGASIVMNGEVGEIIIEPDAEILKDYTEK 244
>ref|ZP_06525360.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. D11]
gb|EFD81549.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. D11]
Length=574
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGAVLDELEDKQILIVDAIKGEVIVSPDVETLQIYKEK 244
>ref|ZP_04574106.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 7_1]
gb|EEO42868.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 7_1]
Length=574
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 190 AHSSIMARSLELPAVVGVGVVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK 244
>ref|ZP_08580763.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 21_1A]
gb|EGN63041.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
sp. 21_1A]
Length=571
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/55 (55%), Positives = 39/55 (71%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +ED +LIVDA G+VIV P E L+ Y+E+
Sbjct 187 AHSSIMARSLELPAVVGVGVVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK 241
>ref|YP_001181205.1| phosphoenolpyruvate-protein phosphotransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gb|ABP68014.1| phosphoenolpyruvate-protein phosphotransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length=556
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 0/56 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERL 57
SH+AI+AR+ +P +VGV AL++I+DGDV+IVD G V+++P + L +Y +R+
Sbjct 186 SHTAIIARTYEIPAIVGVKGALEKIKDGDVVIVDGYQGTVLINPDKQTLEEYEKRM 241
>ref|ZP_08555530.1| phosphoenolpyruvate-protein phosphotransferase [Haloplasma contractile
SSD-17B]
ref|ZP_08555918.1| phosphoenolpyruvate-protein phosphotransferase [Haloplasma contractile
SSD-17B]
gb|EGM29344.1| phosphoenolpyruvate-protein phosphotransferase [Haloplasma contractile
SSD-17B]
gb|EGM30403.1| phosphoenolpyruvate-protein phosphotransferase [Haloplasma contractile
SSD-17B]
Length=568
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 41/54 (76%), Gaps = 0/54 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRE 55
SHSAI+ARSL LP VVG ++ I+DGD++I+DA +G+VI++P E + Y++
Sbjct 186 SHSAIMARSLELPAVVGTKTVMESIQDGDLIILDALNGEVIINPTDEQIVHYKD 239
>ref|ZP_04296512.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH621]
gb|EEK71747.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
AH621]
Length=570
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VIV+P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRAFEEK 243
>ref|ZP_04218785.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-44]
gb|EEL49514.1| Phosphoenolpyruvate-protein phosphotransferase [Bacillus cereus
Rock3-44]
Length=570
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 41/55 (75%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARS+ +P VVG +++I++GD++I+D G+VI++P E LR + E+
Sbjct 189 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIINPSEETLRTFEEK 243
>ref|ZP_01723017.1| phosphotransferase system (PTS) enzyme I [Bacillus sp. B14905]
gb|EAZ86484.1| phosphotransferase system (PTS) enzyme I [Bacillus sp. B14905]
Length=570
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/55 (53%), Positives = 40/55 (73%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
SHSAI+ARSL +P VVG A I+DGD+LIVD SGQV+++P + + Y+E+
Sbjct 188 SHSAIMARSLEIPAVVGTGAATTTIQDGDLLIVDGLSGQVLINPTADVIASYQEK 242
>ref|ZP_04970919.1| phosphoenolpyruvate--protein phosphotransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gb|EDK89003.1| phosphoenolpyruvate--protein phosphotransferase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gb|EHG19474.1| phosphoenolpyruvate-protein phosphotransferase [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length=575
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/55 (53%), Positives = 38/55 (69%), Gaps = 0/55 (0%)
Query 2 SHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRER 56
+HS+I+ARSL LP VVGV L +E+ + LIVDA G+VIV P E L Y+E+
Sbjct 191 AHSSIMARSLELPAVVGVGAVLNELENNETLIVDAIKGEVIVSPNTETLELYKEK 245
>ref|YP_001698041.1| PTS enzyme I [Lysinibacillus sph
Example Output File
Xanthomonas perforans 91-118 ZP_08186820 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas perforans 91-118 ZP_08187447 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas axonopodis pv. cit YP_004852463 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas fuscans subsp. aur ZP_06703927 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas fuscans subsp. aur ZP_06730677 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas campestris pv. ves YP_364856 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas axonopodis pv. cit NP_643288 LSHSAILARSLHLPLVVGVSDALQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas campestris pv. vas ZP_06486094 LSHSAILARSLHLPLVVGVSDAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas campestris pv. mus ZP_06488996 LSHSAILARSLHLPLVVGVSDAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas gardneri ATCC 1986 ZP_08183960 LSHSAILARSLHLPLVVGVSDALQRIDDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas oryzae pv. oryzico AEQ95613 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDAGSGQVIVDPKPEHLRDYRERLR Xanthomonas oryzae pv. oryzae YP_199916 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR Xanthomonas oryzae pv. oryzae YP_450204 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR Xanthomonas oryzae pv. oryzae YP_001915051 LSHSAILARSLHLPLVVGVSEAVQRIEDGDVLIVDASSGQVIVDPKPEHLRDYRERLR Xanthomonas vesicatoria ATCC 3 ZP_08178686 LSHSAILARSLHLPLVVGVSDAVQRIDDGDVLIVDAGSGQVIVDPTPDHLRDYRERLR Xanthomonas campestris pv. cam YP_242393 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR Xanthomonas campestris pv. rap AEL08044 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR Xanthomonas campestris pv. cam NP_638157 LSHSAILARSLHLPLVVGVADAVQRVNDGDVLIVDAGSGQVIVDPTPEHLRDYRERLR Xanthomonas albilineans GPE PC YP_003376621 LSHSAILARSLHLPLVVGVADALQKINDGDVLIIDGNQGVLLLDPTPQDLHDYRLRVR Pseudoxanthomonas spadix BD-a5 AER55770 LSHSAILARSLHMPLVVGASQALSRISDGDALIVDGDSGQVVVDPSARDLRHYRQRLK Stenotrophomonas sp. SKA14 ZP_05136556 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITVNPQADNLRDYRARLK Xylella fastidiosa 9a5c NP_298691 LSHSAILAHSLHLPLIVGAGDLQLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR Xylella fastidiosa Dixon ZP_00651102 LSHSAILAHSLHLPLIVGAGDLLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR Stenotrophomonas maltophilia R YP_002027335 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITSNPQADNLRDYRARLK Stenotrophomonas maltophilia K YP_001970976 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITANPQADNLRDYRVRLK Xylella fastidiosa Ann-1 ZP_00679824 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR Xylella fastidiosa Temecula1 NP_778853 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR Xylella fastidiosa M23 YP_001829379 LSHSAILAHSLHLPLIVGAGELLLQKITNGDMLIIDGNSGEIIVNPSPQDLRHYHSRLR Burkholderia sp. JV3 YP_004791503 LSHSAILARSLHLPLIVNVPQLLSRIADGDVLIIDGADGSITANPLADNLRDYRARLK Pseudoxanthomonas suwonensis 1 YP_004146140 LSHTAILARSLHMPLVVGAAEVLSRINDGDVVMVDGESGQLVLDPDAGDLRRYRE Fusobacterium sp. 2_1_31 ZP_08691282 AHSSIMARSLELPAVVGVGTVLENLEDNQILIVDALNGEVIVNPDEETLKIYREK Fusobacterium sp. 1_1_41FAA ZP_06747157 AHSSIMARSLELPAVVGVGAVLENLEDNQILIVDALNGEVIVNPDEETLKIYREK Bacillus coagulans 36D1 YP_004858248 SHSAIMARSLEIPAVVGTKTAIQDIQNGDLVIVDGNSGDVHVNPTPEMVDEYKQK Fusobacterium sp. 4_1_13 ZP_04573402 AHSSIMARSLELPAVVGVGAVLDRLEDNQILIVDALKGEVIVSPDVETLQIYKEK Paenibacillus mucilaginosus KN YP_004638766 SHSAIMARSLEIPAVVGTKNVLEVVQDGDLVILDGLTGQVIVKPEPAVVEEYREK Fusobacterium nucleatum subsp. ZP_00143701 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK Fusobacterium sp. 3_1_36A2 ZP_05552347 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK Fusobacterium sp. 3_1_27 ZP_06749529 AHSSIMARSLELPAVVGVGEVLDKLEDNQILIVDALKGEVIVSPDVETLQIYKEK Solobacterium moorei F0204 ZP_08028455 SHSAIMARSLEIPAIVGVTDILHTLKSGDLVILDAINGEVITDPTEEQIAEYTKR Fusobacterium periodonticum AT ZP_06026793 AHSSIMARSLELPAVVGVGAVLEDLEDNQIMIVDALKGEVIVAPDEETLKIYREK Bacillus coagulans 2-6 YP_004568386 SHSAIMARSLEIPAVVGTKTAIQDIQNGDLVIVDGNSGDVYVNPTPEIVDEYKQK Bacillus cereus subsp. cytotox YP_001375975 SHSAIMARSMEIPAVVGTKVAMEKIQNGDIVIIDGLDGEVIVNPSEETLRTFEEK Holdemania filiformis DSM 1204 ZP_03634786 SHSAIMARSLEIPAVVGCAGIMEQASQGDLLILDAVEGQVILNPTPEQVKEYEAK Caldalkalibacillus thermarum T ZP_08532509 SHSAIMARSLEIPAVVGTKIVTEKIESGTTIIVDGNEGKVIVNPTPEELHSYEQK Bacillus sp. NRRL B-14911 ZP_01172221 SHSAIMARSMEIPAVVGTKTATEEIQNGDMVIVDGLTGQVHVNPTPEAIESYKEQ Fusobacterium nucleatum subsp. NP_602593 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDALKGEVIVSPDVETLQIYKEK Fusobacterium nucleatum subsp. ZP_06871860 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDALKGEVIVSPDVETLQIYKEK Fusobacterium sp. 11_3_2 ZP_08600521 AHSSIMARSLELPAVVGVGVVLDKLEDNQILIVDAIKGEVIVSPDVETLQIYKEK Bacillus cereus MM3 ZP_04302247 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus Rock3-28 ZP_04235318 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus anthracis str. A0442 ZP_02392103 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus ATCC 10987 NP_980409 SHSAIMARSMEIPAVVGTKFVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus AH820 YP_002453018 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus anthracis str. Ames NP_846501 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus thuringiensis serovar ZP_04086099 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus thuringiensis serovar ZP_04116359 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus thuringiensis serovar ZP_04103753 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus R309803 ZP_04290943 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus E33L YP_085385 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus ATCC 14579 NP_833766 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus G9241 ZP_00236969 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Fusobacterium sp. 3_1_33 ZP_05815865 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK Bacillus cereus 03BB102 YP_002751412 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus thuringiensis serovar ZP_00742226 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Lautropia mirabilis ATCC 51599 ZP_08019358 SHTAILARSLRVAAVTGVDDATGRIRDGDFLILDGDAGKVIVRPDEALLEQYRERQR Bacillus thuringiensis serovar ZP_04128117 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus AH1273 ZP_04176087 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus Rock3-29 ZP_04229460 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus thuringiensis str. Al YP_896403 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus Rock4-18 ZP_04208734 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus AH676 ZP_04193320 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Lysinibacillus fusiformis ZC1 ZP_07050108 SHSAIMARSLEIPAVVGAGIATTTIQDGDYLIVDGLTGQVLVNPSADVIADYQEK Bacillus thuringiensis IBL 200 ZP_04073701 SHSAIMARSMEIPAVVGAKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Fusobacterium nucleatum subsp. EGQ79515 AHSSIMARSLELPAVVGVGAVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK Bacillus cereus BDRD-ST196 ZP_04263665 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus weihenstephanensis KB YP_001646673 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus pseudomycoides DSM 12 ZP_04152713 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRTFEEK Bulleidia extructa W1219 ZP_06341865 SHSAIMARSLEIPAVVGCGDLLSQVKNGDEIILDAITGEIILHPTAEQIASYQEKL Bacillus mycoides DSM 2048 ZP_04170399 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Bacillus cereus AH603 ZP_04199056 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRSFEEK Sebaldella termitidis ATCC 333 YP_003310640 SHSAIMARSLELPAVVGVKDALKEMADGASIVMNGEVGEIIIEPDAEILKDYTEK Fusobacterium sp. D11 ZP_06525360 AHSSIMARSLELPAVVGVGAVLDELEDKQILIVDAIKGEVIVSPDVETLQIYKEK Fusobacterium sp. 7_1 ZP_04574106 AHSSIMARSLELPAVVGVGVVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK Fusobacterium sp. 21_1A ZP_08580763 AHSSIMARSLELPAVVGVGVVLDELEDNQILIVDAIKGEVIVSPDVETLQIYKEK Caldicellulosiruptor saccharol YP_001181205 SHTAIIARTYEIPAIVGVKGALEKIKDGDVVIVDGYQGTVLINPDKQTLEEYEKRM Haloplasma contractile SSD-17B ZP_08555530 SHSAIMARSLELPAVVGTKTVMESIQDGDLIILDALNGEVIINPTDEQIVHYKD Bacillus cereus AH621 ZP_04296512 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIVNPSEETLRAFEEK Bacillus cereus Rock3-44 ZP_04218785 SHSAIMARSMEIPAVVGTKVVMEKIQNGDIVIIDGLDGEVIINPSEETLRTFEEK Bacillus sp. B14905 ZP_01723017 SHSAIMARSLEIPAVVGTGAATTTIQDGDLLIVDGLSGQVLINPTADVIASYQEK Fusobacterium nucleatum subsp. ZP_04970919 AHSSIMARSLELPAVVGVGAVLNELENNETLIVDAIKGEVIVSPNTETLELYKEK Lysinibacillus sphaericus C3-4 YP_001698041 SHSAIMARSLEIPAVVGTGVATTTIQDGDILIVDGLSGQVFVNPTADVIVSYQEK Thermoanaerobacterium xylanoly YP_004470023 SHTAIMARSLEIPAVVGTGNVTKQVSDGDIAIVDGNEGVVIVNPTEDVLKEYEEK Paenibacillus sp. HGF7 ZP_08510395 SHSAIMARSLEIPAVVGTKNVLDLVKDGDLLIVDGLDGDVLINPEPAVVEEYRAK Aeromonas hydrophila subsp. hy YP_857542 SHTSIMARSLELPAIVGTNDITERVKNGDVLVLDAINNQIIINPTAEQLNEAKQ Bacillus sp. O83018 SHSAIMARSLEIPAVVGTKTVTAEVKNGDIVIVDGLDGQVIINPSPELLAQYEQK Geobacillus stearothermophilus P42014 SHSAIMARSLEIPAVVGTKTVTAEVKNGDIVIVDGLDGQVIINPSPELLAQYEQK Spirochaeta thermophila DSM 61 YP_003874513 SHTAILARAFEIPSVLGLSEISRQVKSGQTLIVDGRDGVVIVDPTPEVMEQYQQRMR Geobacillus kaustophilus HTA42 YP_146849 SHSAIMARSLEIPAVVGTKAITAEVQNGDIVIVDGLDGQVVVNPSPELLARYEEK Spirochaeta thermophila DSM 65 AEJ61132 SHTAILARAFEIPSVLGLSEISRQVKSGQTLIVDGRDGVVIVDPTPEVMEQYQQRMR Spirochaeta caldaria DSM 7334 YP_004699170 SHTAILARAFEIPAVLGLSTATVEIKDGDLVIVDGNAGHIICNPSPEVLERYQ
Example Abbreviation File
Original Name Abbreviated Name -------------------------------------------------- Acidimicrobium Acidimicr Atopobiumparvulum Atopparvu AtopobiumrimaeATCC49 Atoprimae AtopobiumvaginaeDSM1 Atopvagin Bacillussubtilis Bacilluss Clostridium Clostridi Collinsellaaerofacie Colinaero Collinsellaintestina Colininte Collinsellastercoris Collinste CollinsellatanakaeiY Collintan Conexibacter Conexibac Coriobacteriumglomer Coriobact Cryptobacterium Cryptobac Eggerthella Eggerthel Gordonibacterpamelae Gordoniba Olsenellasp.oraltaxo Olsenoral Olsenellauli Olsenulii Rubrobacter Rubrobact SlackiaexiguaATCC700 Slackiaex Slackiahel Slackiahe
SIG_STYLE
Styles the given input sequences to show matching elements.
Enter inputs and click "Run Program" to get started.
This program styles the input sequences by matching
identical entries to the first sequence in the file.
Input files can have one or more documentation lines at the top of the file. The documentation lines and sequence lines must be separated by at least one blank (empty) line in between.
Input files can have one or more documentation lines at the top of the file. The documentation lines and sequence lines must be separated by at least one blank (empty) line in between.
View sample input/output files. All files should be in a plain-text format (.txt, .csv, .xml, etc.).
Download files related to this app.
Program Results
Example Input File
test file Myc. tuberculosis 15610745 EIPMYSTCEHHLVAFHGVAHVGYIPGDDGRVTGLSKIARLVDLYAKRPQVQERLT Mycobacterium avium subsp. parat**41406547 EIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSKIARLVDLYAKRPQVQERLT Myc. leprae 15827020 EIPMYSTCEHHLVSFHGVAHIGYLPGADGRVTGLSKIARLVDLYAKRPQVQERLT Nocardia sp. NRRL 5646** 23429479 DIPLYSTCEHHLVSFHGVAHVGYIPGKHGRVTGLSKLARLVDLYAKRPQVQERLT Cor. efficiens 25029097 EIPIYSTCEHHLVPFFGVAHIGYIPGESGQVTGLSKLARLADMYAKRPQVQERLT Cor. diphtheriae 38234565 DIPIYSTCEHHLVPFFGKAHIGYIPGESGKVTGLSKLARLVDLYAKRPQVQERLT Cor. glutamicum 19553889 EIPIYSMCEHHLVPFFGVAHIGYIPGKSGKVTGLSKLARLADMFAKRPQVQERLT Cor. glutamicum 23821576 EIPIYSMCEHHLVPFFGVAHIGYIPGKSGKVTGLSKLARLADMFAKRPQVQERLT Thermobifida fusca 23019086 DIELYSTCEHHLVPFYGAAHVGYIPNTDGRITGLSKLARLVDIYARRPQVQERLT Mag. magnetotacticum 23005668 DIEVYSTCEHHLVPFHGVAHVGYIPNVDGRITGLSKLARLVEVYARRPQVQERLT Str. coelicolor 21221830 DIEVFSTCEHHLVPFRGVAHVGYIPSTSGKITGLSKLARLVDVYARRPQVQERLT Str. avermitilis 29831210 DIEVLSSCEHHLVPFVGVAHVGYIPSTDGKITGLSKLARLVDVYARRPQVQERLT Bif. longum 23336232 DIELYSVCEHHLLPFHGVAHVGYIPAKDG-VMGLSKLARLVEVYARRPQVQERLT Bif. longum NCC2705 23466231 DIELYSVCEHHLLPFHGVAHVGYIPAKDG-VMGLSKLARLVEVYARRPQVQERLT Strep. agalactiae 2603 22537274 DIPFYSMCEHHLVPFYGKAHIAYLPNDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. mutans UA159 24379410 DIPFYSMCEHHLVPFHGLAHVAYIPSDGC-VTGLSKLARAVEVVSKRPQLQERLT Strep. agalactiae NEM 25011234 DIPFYSMCEHHLVPFYGKAHIAYLPNDGR-VTGLSKLARAFEVASKRPQLQERLT Desulf. hafniense 23113071 DIPFYSTCEHHLVPFIGKAHVAYIPAGGK-VTGLSKLARVVESIARRPQLQERLT Strep. pyogenes 15675080 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Thermoan. tengcongensis 20808735 DIPLYSMCEHHLLPFIGVAHVAYLPRKGR-ILGLSKVARIVDVLSKRPQLQERLT Strep. pyogenes MGAS315 21910295 DISFYSVCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Streptococcus pyogenes MGAS8232** 19746048 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Bac. anthracis 21399427 DIPFYSMCEHHLVPFYGVAHVAYIPQGGK-VTGLSKLARTVDTIARRPQLQERIT Strep. pyogenes 20804352 DISFYSMCEHHLVPFYGKAHISYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes SSI-1 28895871 DISFYSVCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 20804340 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 15864606 DISFYSMCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 14253168 DISFYSMCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Desulf. hafniense 23112479 LYSMCEHHLVPFYGKAHVAYIPRKGKVTG-LSKIARVVEGYAKRPQLQERLT--- Strep. pyogenes 20804346 DISFYSMCEHHLVPFYGKAHISYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Moorella thermoacetica ATCC39073**45530375 DIPLYSICEHHFLPFLGRAHVAYIPRGKI--TGLSKLARVVDIAARRPQVQERLT Clo. perfringens 18310001 DITFYSMCEHHLVPFYGKVHIAYIPNGRV--VGLSKLARCVEVYSKKPQLQERLT Strep. pyogenes 3242315 DISFYSMCEHHQVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Bac. halodurans 15614209 DIPFFSMCEHHLVPFFGKAHVGYIPKGGK-VTGLSKLARAVEAVARRPQLQERIT Microbul. degradans 23026692 DIELFSMCEHHMLPFIGKAHVGYIPTGKV--LGLSKIARIVDMYSRRLQIQEQLT D. radiodurans 15805077 DIEFYSMCEHHMLPFYGRAHVAYIPGTRI--LGLSKFARIVDLYSRRLQVQERIT Psychrobacter sp. 273-4** 41689777 IEFYSLCEHHMLPFHGVAHIGYLPNGQVL--GLSKFARIVDMFARRLQIQENLS- Pse. syringae 28869239 DIELYSLCEHHLLPFIGKAHVAYIPNGKV--LGLSKVARIVDMYARRLQIQENLS Cb. tepidum TLS 21673611 DIDIYSMCEHHMLPFFGKAHVAYIPDGKI--VGLSKIPRVVEVFARRLQVQERLT Pse. fluorescens 23059699 DIELYSLCEHHLLPFIGKAHVAYIPTGKV--LGLSKIARLVDMFARRLQIQENLT Glo. violaceus 37521149 DIDLFSMCEHHMLPFIGRAHVGYIPDQKV--VGLSKLARIVEMYARRLQVQERLT Pse. aeruginosa 15596871 DIELYSLCEHHLLPFIGKAHVAYIPNGKV--LGLSKVARIVDMYARRLQIQENMS Lep. interrogans 56601 24216954 DIEMYSLCEHHLLPFYGKAHVAYLPNKKI--IGISKIPRIVDVFARRLQVQERLT Pse. syringae B728a 23469073 DIELYSLCEHHLLPFIGKAHVAYIPQGKV--LGLSKVARIVDMYARRLQIQENLS Pse. putida 26988553 DIELYSMCEHHMLPFIGKAHVAYLPKGKV--LGLSKVARIVDMYARRLQIQENLS Lis. innocua 16801113 DIRFSSMCEHHLVPFFGVAHVAYLPQNGR-VAGLSKLARVVDDVSRRPQLQERIT Lis. monocytogenes 16803972 DIRFSSMCEHHLVPFFGVAHVAYLPQNGR-VAGLSKLARVVDDVSRRPQLQERIT Pse. syringae 28868395 IELYSLCEHHLLPFIGKAHVAYIPTGKVL--GLSKIARIVDMFARRLQIQENLT Pse. syringae B728a 23470196 IELYSLCEHHLLPFIGKAHVAYIPTGKVL--GLSKIARIVDMFARRLQIQENLT Strep. pneumoniae R6 15902312 DIFFHTMCEHHFLPFYGRAHIAYIPDGRV--AGLSKLARTVEVYSKKPQIQERL Strep. pneumoniae TIGR4 15900225 DIFFHTMCEHHFLPFYGRAHIAYIPDGRV--AGLSKLARTVEVYSKKPQIQERL Pse. aeruginosa 15598634 DIELYSLCEHHLLPFIGKAHVAYIPTGKV--LGLSKVARIVDMFARRLQIQENLT Azo. vinelandii 23102275 IELYSLCEHHMLPFIGKAHVAYLPNGKVL--GLSKVARIVDMFARRLQIQENLT Bac. subtilis 16079335 DIAFHSMCEHHLVPFYGKAHVAYIPRGGK-VTGLSKLARAVEAVAKRPQLQERIT Sino. meliloti 15965173 DIPFYSHCEHHMVPIIGKAHIAYLPNGRV--LGLSKIARVVDIYARRLQTQEAMT Cyt. hutchinsonii 23134954 ITFYSNCEHHFVPIIGKAHVAYISNGKVI--GLSKLNRIVDYFARRPQVQERLT Bact. thetaiotaomicron 29349339 DIDFFSLCEHHMLPFYGKAHVAYIPNGYI--TGLSKIARVVDIFSHRLQVQERMT Lac. lactis 15673136 DIPFYSMCEHHMLPFFGKAHVAYIPADGK-IIGLSKIPRLVDYVSRKLSVQENIT Cyt. hutchinsonii 23135864 DITLYSYCEHHFVPIIGKAHVAYISNGKV--IGLSKINRLVEHFSKRPQVQERLT Tricho. erythraeum 23040983 DIDLFSSCEHHILPIIGRAHVAYIPNGKV--IGLSKIARICEMYARRLQVQERLT Campylobacter jejuni subsp. jeju**15791581 DIEFYSLCEHHLLPFFGRAHVAYIPNKKV--VGLSKIPRLVEVFARRLQIQEQLT Por. gingivalis 34540431 DIDFFSMCEHHMLPFFGKAHVGYIPNRYI--TGLSKLPRVVDVFARRLQVQERLT Camp. jejuni 2118180 DIEFYSLCEHHLLPFFGRAHVAYIPNKKV--VGLSKIPRLVEVFARRLQIQEQLT Pse. fluorescens 23060167 DIELYSLCEHHLLPFIGKAHVAYIPSGKV--LGLSKVARIVDMYARRLQIQENLS Actinoplanes teichomyceticus** 40713176 IPIRSVCEHHLLPFIGVAHVGYLPAARIL--GLSKLARVVEMFAHGTQVQERLT Nostoc sp. PCC 7120 17232213 DIDIFSSCEHHILPIIGRAHVAYIPNGKV--IGLSKIARVCEMYARRLQVQERLT Thermosyn. elongatus 22298852 DINFFSLCEHHMLPFIGKAHVAYIPNQRV--IGLSKLARVVEMYARRLQVQERLT Tricho. erythraeum 23039845 DINFFSLCEHHMLPFMGKAHIAYIPNQKV--VGLSKLARVVDMYSRRLQVQERL
Example Output File
test file Myc. tuberculosis 15610745 EIPMYSTCEHHLVAFHGVAHVGYIPGDDGRVTGLSKIARLVDLYAKRPQVQERLT Mycobacterium avium subsp. parat**41406547 ---L---------S------------N---------------------------- Myc. leprae 15827020 -------------S------I--L--A---------------------------- Nocardia sp. NRRL 5646** 23429479 D--L---------S------------KH--------L------------------ Cor. efficiens 25029097 ---I---------P-F----I-----ES-Q------L---A-M------------ Cor. diphtheriae 38234565 D--I---------P-F-K--I-----ES-K------L------------------ Cor. glutamicum 19553889 ---I--M------P-F----I-----KS-K------L---A-MF----------- Cor. glutamicum 23821576 ---I--M------P-F----I-----KS-K------L---A-MF----------- Thermobifida fusca 23019086 D-EL---------P-Y-A-------NT---I-----L-----I--R--------- Mag. magnetotacticum 23005668 D-EV---------P-----------NV---I-----L----EV--R--------- Str. coelicolor 21221830 D-EVF--------P-R---------STS-KI-----L-----V--R--------- Str. avermitilis 29831210 D-EVL-S------P-V---------ST--KI-----L-----V--R--------- Bif. longum 23336232 D-EL--V-----LP-----------AK-- -M----L----EV--R--------- Bif. longum NCC2705 23466231 D-EL--V-----LP-----------AK-- -M----L----EV--R--------- Strep. agalactiae 2603 22537274 D--F--M------P-Y-K--IA-L-N-GR ------L--A-EVAS----L----- Strep. mutans UA159 24379410 D--F--M------P---L---A---S-GC ------L--A-EVVS----L----- Strep. agalactiae NEM 25011234 D--F--M------P-Y-K--IA-L-N-GR ------L--AFEVAS----L----- Desulf. hafniense 23113071 D--F---------P-I-K---A---AGGK ------L--V-ESI-R---L----- Strep. pyogenes 15675080 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Thermoan. tengcongensis 20808735 D--L--M-----LP-I-----A-L-RKGR IL----V--I--VLS----L----- Strep. pyogenes MGAS315 21910295 D-SF--V------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Streptococcus pyogenes MGAS8232** 19746048 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Bac. anthracis 21399427 D--F--M------P-Y-----A---QGGK ------L--T--TI-R---L---I- Strep. pyogenes 20804352 D-SF--M------P-Y-K--IS-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes SSI-1 28895871 D-SF--V------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 20804340 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 15864606 D-SF--M------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 14253168 D-SF--M------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Desulf. hafniense 23112479 LYS-CEHHLVPFYGKAH--YIPRKGKVT- LSKIARVVEGYAKRPQLQERLT Strep. pyogenes 20804346 D-SF--M------P-Y-K--IS-L-S-GR ------L--A-EVAS----L----- Moorella thermoacetica ATCC39073**45530375 D--L--I----FLP-L-R---A---RGKI -----L--V--IA-R--------- Clo. perfringens 18310001 D-TF--M------P-Y-KV-IA---NGRV V----L--C-EV-S-K--L----- Strep. pyogenes 3242315 D-SF--M----Q-P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Bac. halodurans 15614209 D--FF-M------P-F-K-------KGGK ------L--A-EAV-R---L---I- Microbul. degradans 23026692 D-ELF-M----MLP-I-K-------TGKV L-------I--M-SR-L-I--Q-- D. radiodurans 15805077 D-EF--M----MLP-Y-R---A----TRI L----F--I----SR-L-----I- Psychrobacter sp. 273-4** 41689777 IEFYSLCEH-M-PFHGVAHIGYLPN-QVL GLSKFARIVDMFARRLQIQENLS Pse. syringae 28869239 D-EL--L-----LP-I-K---A---NGKV L----V--I--M--R-L-I--N-S Cb. tepidum TLS 21673611 D-DI--M----MLP-F-K---A---DGKI V-----P-V-EVF-R-L------- Pse. fluorescens 23059699 D-EL--L-----LP-I-K---A---TGKV L----------MF-R-L-I--N-- Glo. violaceus 37521149 D-DLF-M----MLP-I-R-------DQKV V----L--I-EM--R-L------- Pse. aeruginosa 15596871 D-EL--L-----LP-I-K---A---NGKV L----V--I--M--R-L-I--NMS Lep. interrogans 56601 24216954 D-E---L-----LP-Y-K---A-L-NKKI I-I---P-I--VF-R-L------- Pse. syringae B728a 23469073 D-EL--L-----LP-I-K---A---QGKV L----V--I--M--R-L-I--N-S Pse. putida 26988553 D-EL--M----MLP-I-K---A-L-KGKV L----V--I--M--R-L-I--N-S Lis. innocua 16801113 D-RFS-M------P-F-----A-L-QNGR -A----L--V--DVSR---L---I- Lis. monocytogenes 16803972 D-RFS-M------P-F-----A-L-QNGR -A----L--V--DVSR---L---I- Pse. syringae 28868395 IELYSLCEH-L-PFIGKAHVAYIPT-KVL GLSKIARIVDMFARRLQIQENLT Pse. syringae B728a 23470196 IELYSLCEH-L-PFIGKAHVAYIPT-KVL GLSKIARIVDMFARRLQIQENLT Strep. pneumoniae R6 15902312 D-FFHTM----FLP-Y-R--IA---DGRV A----L--T-EV-S-K--I---- Strep. pneumoniae TIGR4 15900225 D-FFHTM----FLP-Y-R--IA---DGRV A----L--T-EV-S-K--I---- Pse. aeruginosa 15598634 D-EL--L-----LP-I-K---A---TGKV L----V--I--MF-R-L-I--N-- Azo. vinelandii 23102275 IELYSLCEH-M-PFIGKAHVAYLPN-KVL GLSKVARIVDMFARRLQIQENLT Bac. subtilis 16079335 D-AFH-M------P-Y-K---A---RGGK ------L--A-EAV-----L---I- Sino. meliloti 15965173 D--F--H----M-PII-K--IA-L-NGRV L-------V--I--R-L-T--AM- Cyt. hutchinsonii 23134954 ITFYSNCEH-FVPIIGKAHVAYISN-KVI GLSKLNRIVDYFARRPQVQERLT Bact. thetaiotaomicron 29349339 D-DFF-L----MLP-Y-K---A---NGYI --------V--IFSH-L-----M- Lac. lactis 15673136 D--F--M----MLP-F-K---A---A-GK II-----P----YVSRKLS---NI- Cyt. hutchinsonii 23135864 D-TL--Y----F-PII-K---A--SNGKV I-----N---EHFS---------- Tricho. erythraeum 23040983 D-DLF-S----ILPII-R---A---NGKV I-------ICEM--R-L------- Campylobacter jejuni subsp. jeju**15791581 D-EF--L-----LP-F-R---A---NKKV V-----P---EVF-R-L-I--Q-- Por. gingivalis 34540431 D-DFF-M----MLP-F-K-------NRYI -----LP-V--VF-R-L------- Camp. jejuni 2118180 D-EF--L-----LP-F-R---A---NKKV V-----P---EVF-R-L-I--Q-- Pse. fluorescens 23060167 D-EL--L-----LP-I-K---A---SGKV L----V--I--M--R-L-I--N-S Actinoplanes teichomyceticus** 40713176 IPIRSVCEH-L-PFIGVAHVGYLPAARIL GLSKLARVVEMFAHGTQVQERLT Nostoc sp. PCC 7120 17232213 D-DIF-S----ILPII-R---A---NGKV I-------VCEM--R-L------- Thermosyn. elongatus 22298852 D-NFF-L----MLP-I-K---A---NQRV I----L--V-EM--R-L------- Tricho. erythraeum 23039845 D-NFF-L----MLP-M-K--IA---NQKV V----L--V--M-SR-L------
SIG_STYLE2
Styles the given input sequences to show matching elements. Matches are optimized in a simple manner.
Enter inputs and click "Run Program" to get started.
This program styles the input sequences by matching
identical entries to the first sequence in the file.
It attempts to create the best matches possible by aligning gaps and shifting sequences to the right when possible.
Input files can have one or more documentation lines at the top of the file. The documentation lines and sequence lines must be separated by at least one blank (empty) line in between.
It attempts to create the best matches possible by aligning gaps and shifting sequences to the right when possible.
Input files can have one or more documentation lines at the top of the file. The documentation lines and sequence lines must be separated by at least one blank (empty) line in between.
View sample input/output files. All files should be in a plain-text format (.txt, .csv, .xml, etc.).
Download files related to this app.
Program Results
Example Input File
test file Myc. tuberculosis 15610745 EIPMYSTCEHHLVAFHGVAHVGYIPGDDGRVTGLSKIARLVDLYAKRPQVQERLT Mycobacterium avium subsp. parat**41406547 EIPLYSTCEHHLVSFHGVAHVGYIPGNDGRVTGLSKIARLVDLYAKRPQVQERLT Myc. leprae 15827020 EIPMYSTCEHHLVSFHGVAHIGYLPGADGRVTGLSKIARLVDLYAKRPQVQERLT Nocardia sp. NRRL 5646** 23429479 DIPLYSTCEHHLVSFHGVAHVGYIPGKHGRVTGLSKLARLVDLYAKRPQVQERLT Cor. efficiens 25029097 EIPIYSTCEHHLVPFFGVAHIGYIPGESGQVTGLSKLARLADMYAKRPQVQERLT Cor. diphtheriae 38234565 DIPIYSTCEHHLVPFFGKAHIGYIPGESGKVTGLSKLARLVDLYAKRPQVQERLT Cor. glutamicum 19553889 EIPIYSMCEHHLVPFFGVAHIGYIPGKSGKVTGLSKLARLADMFAKRPQVQERLT Cor. glutamicum 23821576 EIPIYSMCEHHLVPFFGVAHIGYIPGKSGKVTGLSKLARLADMFAKRPQVQERLT Thermobifida fusca 23019086 DIELYSTCEHHLVPFYGAAHVGYIPNTDGRITGLSKLARLVDIYARRPQVQERLT Mag. magnetotacticum 23005668 DIEVYSTCEHHLVPFHGVAHVGYIPNVDGRITGLSKLARLVEVYARRPQVQERLT Str. coelicolor 21221830 DIEVFSTCEHHLVPFRGVAHVGYIPSTSGKITGLSKLARLVDVYARRPQVQERLT Str. avermitilis 29831210 DIEVLSSCEHHLVPFVGVAHVGYIPSTDGKITGLSKLARLVDVYARRPQVQERLT Bif. longum 23336232 DIELYSVCEHHLLPFHGVAHVGYIPAKDG-VMGLSKLARLVEVYARRPQVQERLT Bif. longum NCC2705 23466231 DIELYSVCEHHLLPFHGVAHVGYIPAKDG-VMGLSKLARLVEVYARRPQVQERLT Strep. agalactiae 2603 22537274 DIPFYSMCEHHLVPFYGKAHIAYLPNDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. mutans UA159 24379410 DIPFYSMCEHHLVPFHGLAHVAYIPSDGC-VTGLSKLARAVEVVSKRPQLQERLT Strep. agalactiae NEM 25011234 DIPFYSMCEHHLVPFYGKAHIAYLPNDGR-VTGLSKLARAFEVASKRPQLQERLT Desulf. hafniense 23113071 DIPFYSTCEHHLVPFIGKAHVAYIPAGGK-VTGLSKLARVVESIARRPQLQERLT Strep. pyogenes 15675080 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Thermoan. tengcongensis 20808735 DIPLYSMCEHHLLPFIGVAHVAYLPRKGR-ILGLSKVARIVDVLSKRPQLQERLT Strep. pyogenes MGAS315 21910295 DISFYSVCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Streptococcus pyogenes MGAS8232** 19746048 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Bac. anthracis 21399427 DIPFYSMCEHHLVPFYGVAHVAYIPQGGK-VTGLSKLARTVDTIARRPQLQERIT Strep. pyogenes 20804352 DISFYSMCEHHLVPFYGKAHISYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes SSI-1 28895871 DISFYSVCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 20804340 DISFYSICEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 15864606 DISFYSMCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Strep. pyogenes 14253168 DISFYSMCEHHLVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Desulf. hafniense 23112479 LYSMCEHHLVPFYGKAHVAYIPRKGKVTG-LSKIARVVEGYAKRPQLQERLT--- Strep. pyogenes 20804346 DISFYSMCEHHLVPFYGKAHISYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Moorella thermoacetica ATCC39073**45530375 DIPLYSICEHHFLPFLGRAHVAYIPRGKI--TGLSKLARVVDIAARRPQVQERLT Clo. perfringens 18310001 DITFYSMCEHHLVPFYGKVHIAYIPNGRV--VGLSKLARCVEVYSKKPQLQERLT Strep. pyogenes 3242315 DISFYSMCEHHQVPFYGKAHIAYLPSDGR-VTGLSKLARAVEVASKRPQLQERLT Bac. halodurans 15614209 DIPFFSMCEHHLVPFFGKAHVGYIPKGGK-VTGLSKLARAVEAVARRPQLQERIT Microbul. degradans 23026692 DIELFSMCEHHMLPFIGKAHVGYIPTGKV--LGLSKIARIVDMYSRRLQIQEQLT D. radiodurans 15805077 DIEFYSMCEHHMLPFYGRAHVAYIPGTRI--LGLSKFARIVDLYSRRLQVQERIT Psychrobacter sp. 273-4** 41689777 IEFYSLCEHHMLPFHGVAHIGYLPNGQVL--GLSKFARIVDMFARRLQIQENLS- Pse. syringae 28869239 DIELYSLCEHHLLPFIGKAHVAYIPNGKV--LGLSKVARIVDMYARRLQIQENLS Cb. tepidum TLS 21673611 DIDIYSMCEHHMLPFFGKAHVAYIPDGKI--VGLSKIPRVVEVFARRLQVQERLT Pse. fluorescens 23059699 DIELYSLCEHHLLPFIGKAHVAYIPTGKV--LGLSKIARLVDMFARRLQIQENLT Glo. violaceus 37521149 DIDLFSMCEHHMLPFIGRAHVGYIPDQKV--VGLSKLARIVEMYARRLQVQERLT Pse. aeruginosa 15596871 DIELYSLCEHHLLPFIGKAHVAYIPNGKV--LGLSKVARIVDMYARRLQIQENMS Lep. interrogans 56601 24216954 DIEMYSLCEHHLLPFYGKAHVAYLPNKKI--IGISKIPRIVDVFARRLQVQERLT Pse. syringae B728a 23469073 DIELYSLCEHHLLPFIGKAHVAYIPQGKV--LGLSKVARIVDMYARRLQIQENLS Pse. putida 26988553 DIELYSMCEHHMLPFIGKAHVAYLPKGKV--LGLSKVARIVDMYARRLQIQENLS Lis. innocua 16801113 DIRFSSMCEHHLVPFFGVAHVAYLPQNGR-VAGLSKLARVVDDVSRRPQLQERIT Lis. monocytogenes 16803972 DIRFSSMCEHHLVPFFGVAHVAYLPQNGR-VAGLSKLARVVDDVSRRPQLQERIT Pse. syringae 28868395 IELYSLCEHHLLPFIGKAHVAYIPTGKVL--GLSKIARIVDMFARRLQIQENLT Pse. syringae B728a 23470196 IELYSLCEHHLLPFIGKAHVAYIPTGKVL--GLSKIARIVDMFARRLQIQENLT Strep. pneumoniae R6 15902312 DIFFHTMCEHHFLPFYGRAHIAYIPDGRV--AGLSKLARTVEVYSKKPQIQERL Strep. pneumoniae TIGR4 15900225 DIFFHTMCEHHFLPFYGRAHIAYIPDGRV--AGLSKLARTVEVYSKKPQIQERL Pse. aeruginosa 15598634 DIELYSLCEHHLLPFIGKAHVAYIPTGKV--LGLSKVARIVDMFARRLQIQENLT Azo. vinelandii 23102275 IELYSLCEHHMLPFIGKAHVAYLPNGKVL--GLSKVARIVDMFARRLQIQENLT Bac. subtilis 16079335 DIAFHSMCEHHLVPFYGKAHVAYIPRGGK-VTGLSKLARAVEAVAKRPQLQERIT Sino. meliloti 15965173 DIPFYSHCEHHMVPIIGKAHIAYLPNGRV--LGLSKIARVVDIYARRLQTQEAMT Cyt. hutchinsonii 23134954 ITFYSNCEHHFVPIIGKAHVAYISNGKVI--GLSKLNRIVDYFARRPQVQERLT Bact. thetaiotaomicron 29349339 DIDFFSLCEHHMLPFYGKAHVAYIPNGYI--TGLSKIARVVDIFSHRLQVQERMT Lac. lactis 15673136 DIPFYSMCEHHMLPFFGKAHVAYIPADGK-IIGLSKIPRLVDYVSRKLSVQENIT Cyt. hutchinsonii 23135864 DITLYSYCEHHFVPIIGKAHVAYISNGKV--IGLSKINRLVEHFSKRPQVQERLT Tricho. erythraeum 23040983 DIDLFSSCEHHILPIIGRAHVAYIPNGKV--IGLSKIARICEMYARRLQVQERLT Campylobacter jejuni subsp. jeju**15791581 DIEFYSLCEHHLLPFFGRAHVAYIPNKKV--VGLSKIPRLVEVFARRLQIQEQLT Por. gingivalis 34540431 DIDFFSMCEHHMLPFFGKAHVGYIPNRYI--TGLSKLPRVVDVFARRLQVQERLT Camp. jejuni 2118180 DIEFYSLCEHHLLPFFGRAHVAYIPNKKV--VGLSKIPRLVEVFARRLQIQEQLT Pse. fluorescens 23060167 DIELYSLCEHHLLPFIGKAHVAYIPSGKV--LGLSKVARIVDMYARRLQIQENLS Actinoplanes teichomyceticus** 40713176 IPIRSVCEHHLLPFIGVAHVGYLPAARIL--GLSKLARVVEMFAHGTQVQERLT Nostoc sp. PCC 7120 17232213 DIDIFSSCEHHILPIIGRAHVAYIPNGKV--IGLSKIARVCEMYARRLQVQERLT Thermosyn. elongatus 22298852 DINFFSLCEHHMLPFIGKAHVAYIPNQRV--IGLSKLARVVEMYARRLQVQERLT Tricho. erythraeum 23039845 DINFFSLCEHHMLPFMGKAHIAYIPNQKV--VGLSKLARVVDMYSRRLQVQERL
Example Output File
test file Myc. tuberculosis 15610745 EIPMYSTCEHHLVAFHGVAHVGYIPGDDGRVTGLSKIARLVDLYAKRPQVQERLT Mycobacterium avium subsp. parat**41406547 ---L---------S------------N---------------------------- Myc. leprae 15827020 -------------S------I--L--A---------------------------- Nocardia sp. NRRL 5646** 23429479 D--L---------S------------KH--------L------------------ Cor. efficiens 25029097 ---I---------P-F----I-----ES-Q------L---A-M------------ Cor. diphtheriae 38234565 D--I---------P-F-K--I-----ES-K------L------------------ Cor. glutamicum 19553889 ---I--M------P-F----I-----KS-K------L---A-MF----------- Cor. glutamicum 23821576 ---I--M------P-F----I-----KS-K------L---A-MF----------- Thermobifida fusca 23019086 D-EL---------P-Y-A-------NT---I-----L-----I--R--------- Mag. magnetotacticum 23005668 D-EV---------P-----------NV---I-----L----EV--R--------- Str. coelicolor 21221830 D-EVF--------P-R---------STS-KI-----L-----V--R--------- Str. avermitilis 29831210 D-EVL-S------P-V---------ST--KI-----L-----V--R--------- Bif. longum 23336232 D-EL--V-----LP-----------AK-- -M----L----EV--R--------- Bif. longum NCC2705 23466231 D-EL--V-----LP-----------AK-- -M----L----EV--R--------- Strep. agalactiae 2603 22537274 D--F--M------P-Y-K--IA-L-N-GR ------L--A-EVAS----L----- Strep. mutans UA159 24379410 D--F--M------P---L---A---S-GC ------L--A-EVVS----L----- Strep. agalactiae NEM 25011234 D--F--M------P-Y-K--IA-L-N-GR ------L--AFEVAS----L----- Desulf. hafniense 23113071 D--F---------P-I-K---A---AGGK ------L--V-ESI-R---L----- Strep. pyogenes 15675080 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Thermoan. tengcongensis 20808735 D--L--M-----LP-I-----A-L-RKGR IL----V--I--VLS----L----- Strep. pyogenes MGAS315 21910295 D-SF--V------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Streptococcus pyogenes MGAS8232** 19746048 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Bac. anthracis 21399427 D--F--M------P-Y-----A---QGGK ------L--T--TI-R---L---I- Strep. pyogenes 20804352 D-SF--M------P-Y-K--IS-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes SSI-1 28895871 D-SF--V------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 20804340 D-SF--I------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 15864606 D-SF--M------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Strep. pyogenes 14253168 D-SF--M------P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Desulf. hafniense 23112479 L--M------P-Y-K---A---RKGK ---------V-EG------L----- Strep. pyogenes 20804346 D-SF--M------P-Y-K--IS-L-S-GR ------L--A-EVAS----L----- Moorella thermoacetica ATCC39073**45530375 D--L--I----FLP-L-R---A---RGKI -----L--V--IA-R--------- Clo. perfringens 18310001 D-TF--M------P-Y-KV-IA---NGRV V----L--C-EV-S-K--L----- Strep. pyogenes 3242315 D-SF--M----Q-P-Y-K--IA-L-S-GR ------L--A-EVAS----L----- Bac. halodurans 15614209 D--FF-M------P-F-K-------KGGK ------L--A-EAV-R---L---I- Microbul. degradans 23026692 D-ELF-M----MLP-I-K-------TGKV L-------I--M-SR-L-I--Q-- D. radiodurans 15805077 D-EF--M----MLP-Y-R---A----TRI L----F--I----SR-L-----I- Psychrobacter sp. 273-4** 41689777 -EF--L----MLP------I--L-NGQV L----F--I--MF-R-L-I--N-S Pse. syringae 28869239 D-EL--L-----LP-I-K---A---NGKV L----V--I--M--R-L-I--N-S Cb. tepidum TLS 21673611 D-DI--M----MLP-F-K---A---DGKI V-----P-V-EVF-R-L------- Pse. fluorescens 23059699 D-EL--L-----LP-I-K---A---TGKV L----------MF-R-L-I--N-- Glo. violaceus 37521149 D-DLF-M----MLP-I-R-------DQKV V----L--I-EM--R-L------- Pse. aeruginosa 15596871 D-EL--L-----LP-I-K---A---NGKV L----V--I--M--R-L-I--NMS Lep. interrogans 56601 24216954 D-E---L-----LP-Y-K---A-L-NKKI I-I---P-I--VF-R-L------- Pse. syringae B728a 23469073 D-EL--L-----LP-I-K---A---QGKV L----V--I--M--R-L-I--N-S Pse. putida 26988553 D-EL--M----MLP-I-K---A-L-KGKV L----V--I--M--R-L-I--N-S Lis. innocua 16801113 D-RFS-M------P-F-----A-L-QNGR -A----L--V--DVSR---L---I- Lis. monocytogenes 16803972 D-RFS-M------P-F-----A-L-QNGR -A----L--V--DVSR---L---I- Pse. syringae 28868395 -EL--L-----LP-I-K---A---TGKV L-------I--MF-R-L-I--N-- Pse. syringae B728a 23470196 -EL--L-----LP-I-K---A---TGKV L-------I--MF-R-L-I--N-- Strep. pneumoniae R6 15902312 D-FFHTM----FLP-Y-R--IA---DGRV A----L--T-EV-S-K--I---- Strep. pneumoniae TIGR4 15900225 D-FFHTM----FLP-Y-R--IA---DGRV A----L--T-EV-S-K--I---- Pse. aeruginosa 15598634 D-EL--L-----LP-I-K---A---TGKV L----V--I--MF-R-L-I--N-- Azo. vinelandii 23102275 -EL--L----MLP-I-K---A-L-NGKV L----V--I--MF-R-L-I--N-- Bac. subtilis 16079335 D-AFH-M------P-Y-K---A---RGGK ------L--A-EAV-----L---I- Sino. meliloti 15965173 D--F--H----M-PII-K--IA-L-NGRV L-------V--I--R-L-T--AM- Cyt. hutchinsonii 23134954 -TF--N----F-PII-K---A--SNGKV I----LN-I--YF-R--------- Bact. thetaiotaomicron 29349339 D-DFF-L----MLP-Y-K---A---NGYI --------V--IFSH-L-----M- Lac. lactis 15673136 D--F--M----MLP-F-K---A---A-GK II-----P----YVSRKLS---NI- Cyt. hutchinsonii 23135864 D-TL--Y----F-PII-K---A--SNGKV I-----N---EHFS---------- Tricho. erythraeum 23040983 D-DLF-S----ILPII-R---A---NGKV I-------ICEM--R-L------- Campylobacter jejuni subsp. jeju**15791581 D-EF--L-----LP-F-R---A---NKKV V-----P---EVF-R-L-I--Q-- Por. gingivalis 34540431 D-DFF-M----MLP-F-K-------NRYI -----LP-V--VF-R-L------- Camp. jejuni 2118180 D-EF--L-----LP-F-R---A---NKKV V-----P---EVF-R-L-I--Q-- Pse. fluorescens 23060167 D-EL--L-----LP-I-K---A---SGKV L----V--I--M--R-L-I--N-S Actinoplanes teichomyceticus** 40713176 --IR-V-----LP-I-------L-AARI L----L--V-EMF-HGT------- Nostoc sp. PCC 7120 17232213 D-DIF-S----ILPII-R---A---NGKV I-------VCEM--R-L------- Thermosyn. elongatus 22298852 D-NFF-L----MLP-I-K---A---NQRV I----L--V-EM--R-L------- Tricho. erythraeum 23039845 D-NFF-L----MLP-M-K--IA---NQKV V----L--V--M-SR-L------
SIG_FINDER
This app finds indels or something on an input CLUSTAL file.
Enter inputs and click "Run Program" to get started.
No documentation available.
View sample input/output files. All files should be in a plain-text format (.txt, .csv, .xml, etc.).
Download files related to this app.
Program Results
Example Input File
CLUSTAL 2.1 multiple sequence alignment
1NeisseriameningitidisM6190 MEMKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDK---KEGVIAVKKEK
2NeisseriameningitidisM6190 MEMKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDK---KEGVIAVKKEK
5NeisseriagonorrhoeaeFA6140 --MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGVIAVKK-K
10NeisseriagonorrhoeaeMS11 --MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGVIAVKK-K
3Neisseriameningitidisalpha14 --MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGMIAVKKEK
4NeisseriameningitidisG2136 MEMKQMLLTVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGMIAVKKEK
7NeisserialactamicaY92-1009 --MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGMIAVKKEK
8NeisseriapolysacchareaATCC437 MEMKQMLLAVGVAAVLAGCGKDAGSYEGYWREKSDK---KEGMIVVKKEK
9NeisseriameningitidisM01-2401 MEMKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGMIAVKKEK
6Neisseriagonorrhoeae35/02 --MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDK---KEGVIAVKKEK
11NeisserialactamicaATCC23970 MEMKQMLLAVGVAAVLAGCGKDADGYEGYWREKSDK---KEGMIAVKKEK
12Neisseriameningitidisalpha27 --MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDK---KEGMIAVKKEK
13NeisseriabacilliformisATCCBA --MKKFSLTVCAALLLAACGGGYEQYEGYWKRQQDNDKARPDVMRIVKED
14KingelladenitrificansATCC333 MKMKKIALSVMVLMLAACGGKSADDYVGTWQRDEHK---WLQFIEIKKDN
**:: *:* . : * * . * * *:....: .: : * .
1NeisseriameningitidisM6190 GNYFLNKINVFTGK-----EESLLLSEKD-GALSINTGIGEIPIKLSDDG
2NeisseriameningitidisM6190 GNYFLNKINVFTGK-----EESLLLSEKD-GALSINTGIGEIPIKLSDDG
5NeisseriagonorrhoeaeFA6140 GNYFLNKINVFTGK-----EESLLLSEKD-GALSINTGIGEIPIKLSDDG
10NeisseriagonorrhoeaeMS11 VNYFLNKINVFTGK-----EESLLLSEKD-GALSINTGIGEIPIKLSDDG
3Neisseriameningitidisalpha14 GNYFLNKINVVTGK-----EESMLLSEKD-GELSINTGIGEIPIKLSDDG
4NeisseriameningitidisG2136 GNYFLNKINVVTGK-----EESMLLSEKD-GALSINTGIGEIPIKLSDDG
7NeisserialactamicaY92-1009 GNYFLNKINVVTGK-----EKSMLLSEKD-GELSINTGIGEIPIKLSDDG
8NeisseriapolysacchareaATCC437 GNYFLNKINVVTGK-----EESMLLSEKD-GELSINTGIGEIPIKLSDDG
9NeisseriameningitidisM01-2401 GNYFLNKINVVTGK-----EESMLLSEKD-GELSINTGIGEIPIKLSDDG
6Neisseriagonorrhoeae35/02 GNYFLNKINVFTGK-----EESLLLSEKD-GALSINTGIGEIPIKLSDDG
11NeisserialactamicaATCC23970 GNYFLNKINVVTGK-----ETSVVLSEKD-GALSINTGIGEIPIKLSDDG
12Neisseriameningitidisalpha27 GNYFLNKINVFTGK-----EESMLLSEKD-GALSINTGIGEIPIKLSDDG
13NeisseriabacilliformisATCCBA SKTYLLKENVLPDRKGEIHEKSMVLSQKDDGTLAVDTGFGSIPLVLSEDG
14KingelladenitrificansATCC333 GNYTMTQKGSSDVQ-------TQVLSEKD-GELSLNIGMGDMPLKLSDDK
: : : . : : :**:** * *::: *:*.:*: **:*
1NeisseriameningitidisM6190 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQ
2NeisseriameningitidisM6190 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQ
5NeisseriagonorrhoeaeFA6140 KELYVERRRYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQ
10NeisseriagonorrhoeaeMS11 KELYVERRRYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQ
3Neisseriameningitidisalpha14 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQ
4NeisseriameningitidisG2136 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQ
7NeisserialactamicaY92-1009 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTVQAYLDAQKALPSNQ
8NeisseriapolysacchareaATCC437 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTVQAYLDAQKALPSNQ
9NeisseriameningitidisM01-2401 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYRDARNALPSNQ
6Neisseriagonorrhoeae35/02 KELYVERRRYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQ
11NeisserialactamicaATCC23970 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQ
12Neisseriameningitidisalpha27 KELYVERRQYVKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALP---
13NeisseriabacilliformisATCCBA KTLRAERRAFDKISEGEFGELKQKMEQDQQRCDALKKEYQAERDANPSPA
14KingelladenitrificansATCC333 KTLLVNLYAGGSNS---------FRKVEDESCKNLLNEYQSGLENMPRDI
* * .: . . .:: * : * . *
1NeisseriameningitidisM6190 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLL------------
2NeisseriameningitidisM6190 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLL------------
5NeisseriagonorrhoeaeFA6140 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLF------------
10NeisseriagonorrhoeaeMS11 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGRTPALLLWQGTTGRMPPSE
3Neisseriameningitidisalpha14 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLL------------
4NeisseriameningitidisG2136 TYQQHQAAIEQLKRRFEAEFDELEKEIKCNGK-PTLLF------------
7NeisserialactamicaY92-1009 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGRPRALLL------------
8NeisseriapolysacchareaATCC437 TYQQRQEAIEQLKRRFEAEFDELEKEIKCNGRPRALLL------------
9NeisseriameningitidisM01-2401 TYQQHLAAIEQLKRRFEAEFDELEKEIKCNGRSPALLL------------
6Neisseriagonorrhoeae35/02 TYQQRQAAIEQLKRRFEAEFDELEKEIKCNGRTPALLLWQGTTGRMPPSE
11NeisserialactamicaATCC23970 TYQQHQAAIEQLKRRFEAEFDELEKEIKCNGRKLALSF------------
12Neisseriameningitidisalpha27 -VKPDVSAASGGDRAVETAV------------------------------
13NeisseriabacilliformisATCCBA PGSGGD--WNAWKQKNEAMKEKYKTQRDQITGCDIFIF------------
14KingelladenitrificansATCC333 FSEDYKTASANLKSLQEKYRSQCDKK------------------------
. . *
1NeisseriameningitidisM6190 --------------------------------------------------
2NeisseriameningitidisM6190 --------------------------------------------------
5NeisseriagonorrhoeaeFA6140 --------------------------------------------------
10NeisseriagonorrhoeaeMS11 SDAWFPYRYGRAGMSAFFVRMRLNTRPILSVCKGDFRSGGNPFRQIRKAF
3Neisseriameningitidisalpha14 --------------------------------------------------
4NeisseriameningitidisG2136 --------------------------------------------------
7NeisserialactamicaY92-1009 --------------------------------------------------
8NeisseriapolysacchareaATCC437 --------------------------------------------------
9NeisseriameningitidisM01-2401 --------------------------------------------------
6Neisseriagonorrhoeae35/02 SDAWFPYRYGRAGMSAFFCSDAFEYPSDSVRLQGGFPFGRKSIPSNKKGV
11NeisserialactamicaATCC23970 --------------------------------------------------
12Neisseriameningitidisalpha27 --------------------------------------------------
13NeisseriabacilliformisATCCBA --------------------------------------------------
14KingelladenitrificansATCC333 --------------------------------------------------
1NeisseriameningitidisM6190 --------------------------------------------------
2NeisseriameningitidisM6190 --------------------------------------------------
5NeisseriagonorrhoeaeFA6140 --------------------------------------------------
10NeisseriagonorrhoeaeMS11 CPAGRLVPAVSQNFALMRPIG-----------------------------
3Neisseriameningitidisalpha14 --------------------------------------------------
4NeisseriameningitidisG2136 --------------------------------------------------
7NeisserialactamicaY92-1009 --------------------------------------------------
8NeisseriapolysacchareaATCC437 --------------------------------------------------
9NeisseriameningitidisM01-2401 --------------------------------------------------
6Neisseriagonorrhoeae35/02 LSDRPACACGIAKLRLNAPDWLGTGFGRHCFAGSRAVFGLHAVGQELPDV
11NeisserialactamicaATCC23970 --------------------------------------------------
12Neisseriameningitidisalpha27 --------------------------------------------------
13NeisseriabacilliformisATCCBA --------------------------------------------------
14KingelladenitrificansATCC333 --------------------------------------------------
1NeisseriameningitidisM6190 --------------------------------------------------
2NeisseriameningitidisM6190 --------------------------------------------------
5NeisseriagonorrhoeaeFA6140 --------------------------------------------------
10NeisseriagonorrhoeaeMS11 --------------------------------------------------
3Neisseriameningitidisalpha14 --------------------------------------------------
4NeisseriameningitidisG2136 --------------------------------------------------
7NeisserialactamicaY92-1009 --------------------------------------------------
8NeisseriapolysacchareaATCC437 --------------------------------------------------
9NeisseriameningitidisM01-2401 --------------------------------------------------
6Neisseriagonorrhoeae35/02 SCGFLFAGKFAGFVAVTPKIIHAHRAFDRAACILRHNQAVEGFAGNRMGG
11NeisserialactamicaATCC23970 --------------------------------------------------
12Neisseriameningitidisalpha27 --------------------------------------------------
13NeisseriabacilliformisATCCBA --------------------------------------------------
14KingelladenitrificansATCC333 --------------------------------------------------
1NeisseriameningitidisM6190 ---
2NeisseriameningitidisM6190 ---
5NeisseriagonorrhoeaeFA6140 ---
10NeisseriagonorrhoeaeMS11 ---
3Neisseriameningitidisalpha14 ---
4NeisseriameningitidisG2136 ---
7NeisserialactamicaY92-1009 ---
8NeisseriapolysacchareaATCC437 ---
9NeisseriameningitidisM01-2401 ---
6Neisseriagonorrhoeae35/02 GDK
11NeisserialactamicaATCC23970 ---
12Neisseriameningitidisalpha27 ---
13NeisseriabacilliformisATCCBA ---
14KingelladenitrificansATCC333 ---
Example Output File
Signature Finder Results
1NeisseriameningitidisM6190 MEMKQMLLAVGVVAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
2NeisseriameningitidisM6190 MEMKQMLLAVGVVAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
5NeisseriagonorrhoeaeFA6140 --MKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
10NeisseriagonorrhoeaeMS11 --MKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
3Neisseriameningitidisalpha14 --MKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
4NeisseriameningitidisG2136 MEMKQMLLTVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
7NeisserialactamicaY92-1009 --MKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
8NeisseriapolysacchareaATCC437 MEMKQMLLAVGVAAVL <0< AGCGKDAGSYEG <1< YWREKSDK---K
9NeisseriameningitidisM01-2401 MEMKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
6Neisseriagonorrhoeae35/02 --MKQMLLAVGVAAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
11NeisserialactamicaATCC23970 MEMKQMLLAVGVAAVL <0< AGCGKDADGYEG <1< YWREKSDK---K
12Neisseriameningitidisalpha27 --MKQMLLAVGVVAVL <0< AGCGKDAGGYEG <1< YWREKSDK---K
13NeisseriabacilliformisATCCBA --MKKFSLTVCAALLL <0< AACGGGYEQYEG <1< YWKRQQDNDKAR
14KingelladenitrificansATCC333 MKMKKIALSVMVLMLA <0< ACGGKSADDYVG <1< TWQRDEHK---W
**:: *:* . : * * . * * *:....:
1NeisseriameningitidisM6190 EGVI <2< AVKKEKGNYFLNKIN <3< >0> VFTGK-----EESL >
2NeisseriameningitidisM6190 EGVI <2< AVKKEKGNYFLNKIN <3< >0> VFTGK-----EESL >
5NeisseriagonorrhoeaeFA6140 EGVI <2< AVKK-KGNYFLNKIN <3< >0> VFTGK-----EESL >
10NeisseriagonorrhoeaeMS11 EGVI <2< AVKK-KVNYFLNKIN <3< >0> VFTGK-----EESL >
3Neisseriameningitidisalpha14 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VVTGK-----EESM >
4NeisseriameningitidisG2136 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VVTGK-----EESM >
7NeisserialactamicaY92-1009 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VVTGK-----EKSM >
8NeisseriapolysacchareaATCC437 EGMI <2< VVKKEKGNYFLNKIN <3< >0> VVTGK-----EESM >
9NeisseriameningitidisM01-2401 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VVTGK-----EESM >
6Neisseriagonorrhoeae35/02 EGVI <2< AVKKEKGNYFLNKIN <3< >0> VFTGK-----EESL >
11NeisserialactamicaATCC23970 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VVTGK-----ETSV >
12Neisseriameningitidisalpha27 EGMI <2< AVKKEKGNYFLNKIN <3< >0> VFTGK-----EESM >
13NeisseriabacilliformisATCCBA PDVM <2< RIVKEDSKTYLLKEN <3< >0> VLPDRKGEIHEKSM >
14KingelladenitrificansATCC333 LQFI <2< EIKKDNGNYTMTQKG <3< >0> SSDVQ-------TQ >
.: : * . : : : . : :
1NeisseriameningitidisM6190 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
2NeisseriameningitidisM6190 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
5NeisseriagonorrhoeaeFA6140 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRRY
10NeisseriagonorrhoeaeMS11 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRRY
3Neisseriameningitidisalpha14 1> LLSEKD-GELSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
4NeisseriameningitidisG2136 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
7NeisserialactamicaY92-1009 1> LLSEKD-GELSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
8NeisseriapolysacchareaATCC437 1> LLSEKD-GELSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
9NeisseriameningitidisM01-2401 1> LLSEKD-GELSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
6Neisseriagonorrhoeae35/02 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRRY
11NeisserialactamicaATCC23970 1> VLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
12Neisseriameningitidisalpha27 1> LLSEKD-GALSI >2> NTGIGEIPIKLSDDGKE >3> LYVERRQY
13NeisseriabacilliformisATCCBA 1> VLSQKDDGTLAV >2> DTGFGSIPLVLSEDGKT >3> LRAERRAF
14KingelladenitrificansATCC333 1> VLSEKD-GELSL >2> NIGMGDMPLKLSDDKKT >3> LLVNLYAG
:**:** * *:: : *:*.:*: **:* * * .:
1NeisseriameningitidisM6190 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQRQAAIE
2NeisseriameningitidisM6190 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQRQAAIE
5NeisseriagonorrhoeaeFA6140 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIE
10NeisseriagonorrhoeaeMS11 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIE
3Neisseriameningitidisalpha14 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIE
4NeisseriameningitidisG2136 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARKALPSNQTYQQHQAAIE
7NeisserialactamicaY92-1009 VKTD----AAMKDKIIAHQKKCGQTVQAYLDAQKALPSNQTYQQRQAAIE
8NeisseriapolysacchareaATCC437 VKTD----AAMKDKIIAHQKKCGQTVQAYLDAQKALPSNQTYQQRQEAIE
9NeisseriameningitidisM01-2401 VKTD----AAMKDKIIAHQKKCGQTAQAYRDARNALPSNQTYQQHLAAIE
6Neisseriagonorrhoeae35/02 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIE
11NeisserialactamicaATCC23970 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQHQAAIE
12Neisseriameningitidisalpha27 VKTD----AAMKDKIIAHQKKCGQTAQAYLDARNALP----VKPDVSAAS
13NeisseriabacilliformisATCCBA DKISEGEFGELKQKMEQDQQRCDALKKEYQAERDANPSPAPGSGGD--WN
14KingelladenitrificansATCC333 GSNS---------FRKVEDESCKNLLNEYQSGLENMPRDIFSEDYKTASA
. . .:: * : * . * .
1NeisseriameningitidisM6190 QLKRRFEAEFDELEKEIKCNGK-PTLLL----------------------
2NeisseriameningitidisM6190 QLKRRFEAEFDELEKEIKCNGK-PTLLL----------------------
5NeisseriagonorrhoeaeFA6140 QLKRRFEAEFDELEKEIKCNGK-PTLLF----------------------
10NeisseriagonorrhoeaeMS11 QLKRRFEAEFDELEKEIKCNGRTPALLLWQGTTGRMPPSESDAWFPYRYG
3Neisseriameningitidisalpha14 QLKRRFEAEFDELEKEIKCNGK-PTLLL----------------------
4NeisseriameningitidisG2136 QLKRRFEAEFDELEKEIKCNGK-PTLLF----------------------
7NeisserialactamicaY92-1009 QLKRRFEAEFDELEKEIKCNGRPRALLL----------------------
8NeisseriapolysacchareaATCC437 QLKRRFEAEFDELEKEIKCNGRPRALLL----------------------
9NeisseriameningitidisM01-2401 QLKRRFEAEFDELEKEIKCNGRSPALLL----------------------
6Neisseriagonorrhoeae35/02 QLKRRFEAEFDELEKEIKCNGRTPALLLWQGTTGRMPPSESDAWFPYRYG
11NeisserialactamicaATCC23970 QLKRRFEAEFDELEKEIKCNGRKLALSF----------------------
12Neisseriameningitidisalpha27 GGDRAVETAV----------------------------------------
13NeisseriabacilliformisATCCBA AWKQKNEAMKEKYKTQRDQITGCDIFIF----------------------
14KingelladenitrificansATCC333 NLKSLQEKYRSQCDKK----------------------------------
. *
1NeisseriameningitidisM6190 --------------------------------------------------
2NeisseriameningitidisM6190 --------------------------------------------------
5NeisseriagonorrhoeaeFA6140 --------------------------------------------------
10NeisseriagonorrhoeaeMS11 RAGMSAFFVRMRLNTRPILSVCKGDFRSGGNPFRQIRKAFCPAGRLVPAV
3Neisseriameningitidisalpha14 --------------------------------------------------
4NeisseriameningitidisG2136 --------------------------------------------------
7NeisserialactamicaY92-1009 --------------------------------------------------
8NeisseriapolysacchareaATCC437 --------------------------------------------------
9NeisseriameningitidisM01-2401 --------------------------------------------------
6Neisseriagonorrhoeae35/02 RAGMSAFFCSDAFEYPSDSVRLQGGFPFGRKSIPSNKKGVLSDRPACACG
11NeisserialactamicaATCC23970 --------------------------------------------------
12Neisseriameningitidisalpha27 --------------------------------------------------
13NeisseriabacilliformisATCCBA --------------------------------------------------
14KingelladenitrificansATCC333 --------------------------------------------------
1NeisseriameningitidisM6190 --------------------------------------------------
2NeisseriameningitidisM6190 --------------------------------------------------
5NeisseriagonorrhoeaeFA6140 --------------------------------------------------
10NeisseriagonorrhoeaeMS11 SQNFALMRPIG---------------------------------------
3Neisseriameningitidisalpha14 --------------------------------------------------
4NeisseriameningitidisG2136 --------------------------------------------------
7NeisserialactamicaY92-1009 --------------------------------------------------
8NeisseriapolysacchareaATCC437 --------------------------------------------------
9NeisseriameningitidisM01-2401 --------------------------------------------------
6Neisseriagonorrhoeae35/02 IAKLRLNAPDWLGTGFGRHCFAGSRAVFGLHAVGQELPDVSCGFLFAGKF
11NeisserialactamicaATCC23970 --------------------------------------------------
12Neisseriameningitidisalpha27 --------------------------------------------------
13NeisseriabacilliformisATCCBA --------------------------------------------------
14KingelladenitrificansATCC333 --------------------------------------------------
1NeisseriameningitidisM6190 -------------------------------------------
2NeisseriameningitidisM6190 -------------------------------------------
5NeisseriagonorrhoeaeFA6140 -------------------------------------------
10NeisseriagonorrhoeaeMS11 -------------------------------------------
3Neisseriameningitidisalpha14 -------------------------------------------
4NeisseriameningitidisG2136 -------------------------------------------
7NeisserialactamicaY92-1009 -------------------------------------------
8NeisseriapolysacchareaATCC437 -------------------------------------------
9NeisseriameningitidisM01-2401 -------------------------------------------
6Neisseriagonorrhoeae35/02 AGFVAVTPKIIHAHRAFDRAACILRHNQAVEGFAGNRMGGGDK
11NeisserialactamicaATCC23970 -------------------------------------------
12Neisseriameningitidisalpha27 -------------------------------------------
13NeisseriabacilliformisATCCBA -------------------------------------------
14KingelladenitrificansATCC333 -------------------------------------------
SIG_CREATE_2
Updated version of Sig-create
No documentation available.
View sample input/output files. All files should be in a plain-text format (.txt, .csv, .xml, etc.).
Download files related to this app.
